Professor Emma McBryde
Honorary Professor & Professorial Research Fellow
UQ Centre for Clinical Research
+61 7 334 65070
Researcher biography
My research focus encompasses a broad range of methods – Bayesian Inference, statistical models, compartmental models, stochastic models, social network analysis, forecasting methods- and a broad interest in emerging pathogens –tuberculosis, influenza and hospital associated pathogens and emerging infectious diseases including SARS, Ebola and COVID-19. I have led research teams to complete international consultancies, modeling of tuberculosis control in our region, and international research collaborations in the area of tuberculosis, healthcare associated infections SARS and Ebola and COVID-19.
I have diverse cross-disciplinary skills, as an infectious diseases physician (FRACP) and mathematical modeler (PhD -QUT), epidemiologist, and biostatistician (MBios Uni Melb). Since 2003, I have worked on interleaving clinical research with mathematical modeling and simulation of infectious diseases transmission. In this time, I have developed the ability to communicate and collaborate across the disciplines of mathematics, biostatistics, epidemiology, public health and clinical infectious diseases. I lead a team of highly skilled mathematicians and biostatisticians, epidemiologists.
I am currently the Professor of Infectious Diseases Epidemiology at the University of Queensland Centre for Clinical Research, working with the ODeSI program. I continue clinical work as a physician for the TB control unit at the Torres Strait and Cape York Health Service. My collaborators across Australia include as a chief investigator on two Centres for Research Excellence in forecasting and in tuberculosis. I work with researchers in major national (Monash University, Australian National University, Curtin University and the Doherty Institute, UWA, UQ) and international universities (Imperial College, LSHTM, Harvard, Stanford, Oxford, Mahidol).
COVID-19 work to date includes providing modelling and advice for: the commonwealth Government, Victorian State Government, OzSage Indigenous working group, and leading the AUS-CMI Australian Covid-19 modelling initiative group, the Global Fund against Malaria TB and AIDS, and the World Health Organization in conjunction with countries in the Asia Pacific Regions.
My major methodlogical areas of research in active development are (1) forecasting (2) scenario analysis for decision support (3) disease dynamic insights through data analysis including Bayesian inference and machine learning.
Book Chapter
Denholm, Justin T. and McBryde, Emma S. (2012). Meta-analysis and risk factors for tuberculosis susceptibility. Tuberculosis: Risk Factors, Drug Resistance and Treatment. (pp. 139-154) Nova Science Publishers, Inc..
Journal Articles
Bui, Long Viet, Ragonnet, Romain, Hughes, Angus E., Nguyen, Hoa Binh, Do, Nam Hoang, McBryde, Emma S., Sexton, Justin, Nguyen, Thuy Phuong, Shipman, David S., Fox, Greg J. and Trauer, James M. (2025). BAYESIAN SPATIO-TEMPORAL MODELLING OF TUBERCULOSIS IN VIETNAM: INSIGHTS FROM A LOCAL-AREA ANALYSIS. Epidemiology and Infection, 153 e34, 1-22. doi: 10.1017/s0950268825000214
Ragonnet, Romain, Hughes, Angus E., Shipman, David S., Meehan, Michael T., Henderson, Alec S., Briffoteaux, Guillaume, Melab, Nouredine, Tuyttens, Daniel, McBryde, Emma S. and Trauer, James M. (2025). Estimating the impact of school closures on the COVID-19 dynamics in 74 countries: A modelling analysis. PLOS Medicine, 22 (1) e1004512, e1004512-1. doi: 10.1371/journal.pmed.1004512
Teeluck, Mohabeer, Adegboye, Oyelola, Karl, Stephan, Iyaloo, Diana P. and McBryde, Emma (2025). Understanding the Effect of a Changing Climate on the Re-Emergence of Mosquito-Borne Diseases in Vulnerable Small Island Nations: A Systematic Review. Zoonoses and Public Health, 72 (3), 223-247. doi: 10.1111/zph.13212
Bui, Viet Long, Hughes, Angus E., Ragonnet, Romain, Meehan, Michael T., Henderson, Alec, McBryde, Emma S. and Trauer, James M. (2024). Agent-based modelling of Mycobacterium tuberculosis transmission: a systematic review. BMC Infectious Diseases, 24 (1) 1394, 1-11. doi: 10.1186/s12879-024-10245-y
Ratnayake, H. E., Eisen, D. P., Adegboye, O. A., Pak, A. and McBryde, E. S. (2024). Bacteraemia in tropical Australia: a review. Current Tropical Medicine Reports, 11 (4), 167-178. doi: 10.1007/s40475-024-00326-y
Cirillo, Daniela, Anthony, Richard, Gagneux, Sebastien, Horsburgh, C Robert, Hasan, Rumina, Darboe, Saffiatou, Laniado-Laborin, Rafael, Probandari, Ari, Tukvadze, Nestani, Arcêncio, Ricardo A, Bimba, John S, Brighenti, Susanna, Chesov, Dumitru, Chiang, Chen-Yuan, Kalmambetova, Gulmira, Knight, Gwenan, Konstantynovska, Olha, Kruse, Alexandra, Lange, Christoph, Mayanja-Kizza, Harriet, McBryde, Emma, Min, Jinsoo, Sanchez-Montalva, Adrian, Sulis, Giorgia, Tsogt, Bazarragchaa, Van Der Walt, Martie, Yeboah-Manu, Dorothy and Hauser, Janika (2024). A successful UN High-Level Meeting on antimicrobial resistance must build on the 2023 UN High-Level Meeting on tuberculosis. The Lancet Global Health, 12 (8), e1225-e1226. doi: 10.1016/S2214-109X(24)00229-8
Doyle, Michael, Jackson-Pulver, Lisa, Harley, Samuel, Ring, Ian and McBryde, Emma (2024). Could Adequate and More Appropriate Housing for Aboriginal and Torres Strait Islander People in New South Wales, Australia, Reduce the Risk of Poorer Health Outcomes?. International Journal of Indigenous Health, 19 (1), 1. doi: 10.32799/ijih.v19i1.41293
Henderson, Alec S., Hickson, Roslyn I., Furlong, Morgan, McBryde, Emma S. and Meehan, Michael T. (2024). Reproducibility of COVID-era infectious disease models. Epidemics, 46 100743, 1-6. doi: 10.1016/j.epidem.2024.100743
Edelman, Alexandra, Allen, Tammy, Devine, Susan, Horwood, Paul F., McBryde, Emma S., Mudd, Julie, Warner, Jeffrey and Topp, Stephanie M (2024). “Hospitals respond to demand. Public health needs to respond to risk”: health system lessons from a case study of northern Queensland’s COVID-19 surveillance and response. BMC Health Services Research, 24 (1) 104, 1-11. doi: 10.1186/s12913-023-10502-x
Ogunlade, Samson T., Adekunle, Adeshina I. and McBryde, Emma S. (2024). Mitigating dengue transmission in Africa: the need for Wolbachia-infected mosquitoes' rollout. Frontiers in Public Health, 12 1506072. doi: 10.3389/fpubh.2024.1506072
Foster, J’Belle, Marais, Ben J., Mendez, Diana and McBryde, Emma S. (2023). Critical review of tuberculosis diagnosis in children from Papua New Guinea presenting to health facilities in the Torres Strait Islands, Australia. Microorganisms, 11 (12) 2947, 1-12. doi: 10.3390/microorganisms11122947
Meehan, Michael T., Hughes, Angus, Ragonnet, Romain R., Adekunle, Adeshina I., Trauer, James M., Jayasundara, Pavithra, McBryde, Emma S. and Henderson, Alec S. (2023). Replicating superspreader dynamics with compartmental models. Scientific Reports, 13 (1) 15319, 1-11. doi: 10.1038/s41598-023-42567-3
Ogunlade, Samson T., Adekunle, Adeshina I., Meehan, Michael T. and McBryde, Emma S. (2023). Quantifying the impact of Wolbachia releases on dengue infection in Townsville, Australia. Scientific Reports, 13 (1) 14932, 1-12. doi: 10.1038/s41598-023-42336-2
Adegboye, Oyelola A., Alele, Faith O., Pak, Anton, Castellanos, Maria E., Abdullahi, Mohammed A. S., Okeke, Malachy I., Emeto, Theophilus I. and McBryde, Emma S. (2023). A resurgence and re-emergence of diphtheria in Nigeria, 2023. Therapeutic Advances in Infectious Disease, 10, 1-4. doi: 10.1177/20499361231161936
Basseal, J. M., Bennett, C. M., Collignon, P., Currie, B. J., Durrheim, D. N., Leask, J., McBryde, E. S., McIntyre, P., Russell, F. M., Smith, D. W., Sorrell, T. C. and Marais, B. J. (2023). Key lessons from the COVID-19 public health response in Australia. Lancet Regional Health-Western Pacific, 30 100616, 1-8. doi: 10.1016/j.lanwpc.2022.100616
Ogunlade, Samson T., Meehan, Michael T., Adekunle, Adeshina I. and McBryde, Emma S. (2023). A systematic review of mathematical models of dengue transmission and vector control: 2010-2020. Viruses, 15 (1) 254, 1-35. doi: 10.3390/v15010254
Foster, J'Belle, Mendez, Diana, Marais, Ben J., Peniyamina, Dunstan and McBryde, Emma S. (2022). Predictors of unfavourable treatment outcome in patients diagnosed with drug-resistant tuberculosis in the Torres Strait/Papua New Guinea border region. PLoS One, 17 (12) e0266436, 1-15. doi: 10.1371/journal.pone.0266436
Ogunlade, Samson T., Adekunle, Adeshina, McBryde, Emma S. and Meehan, Michael T. (2022). Modelling the ecological dynamics of mosquito populations with multiple co-circulating Wolbachia strains. Scientific Reports, 12 (1) 20826, 1-14. doi: 10.1038/s41598-022-25242-x
Hughes, Angus, Ragonnet, Romain, Jayasundara, Pavithra, Ngo, Hoang-Anh, de Lara-Tuprio, Elvira, Estuar, Maria Regina Justina, Teng, Timothy Robin, Boon, Law Kian, Peariasamy, Kalaiarasu M., Chong, Zhuo-Lin, Ghazali, Izzuna Mudla M, Fox, Greg J., Nguyen, Thu-Anh, Le, Linh-Vi, Abayawardana, Milinda, Shipman, David, McBryde, Emma S., Meehan, Michael T., Caldwell, Jamie M. and Trauer, James M. (2022). COVID-19 collaborative modelling for policy response in the Philippines, Malaysia and Vietnam. The Lancet Regional Health - Western Pacific, 29 100563, 1-8. doi: 10.1016/j.lanwpc.2022.100563
Steinig, Eike, Aglua, Izzard, Duchene, Sebastian, Meehan, Michael T., Yoannes, Mition, Firth, Cadhla, Jaworski, Jan, Drekore, Jimmy, Urakoko, Bohu, Poka, Harry, Wurr, Clive, Ebos, Eri, Nangen, David, Mueller, Elke, Mulvey, Peter, Jackson, Charlene, Blomfeldt, Anita, Aamot, Hege Vangstein, Laman, Moses, Manning, Laurens, Earls, Megan, Coleman, David C., Greenhill, Andrew, Ford, Rebecca, Stegger, Marc, Syed, Muhammad Ali, Jamil, Bushra, Monecke, Stefan, Ehricht, Ralf ... McBryde, Emma (2022). Phylodynamic signatures in the emergence of community-associated MRSA. Proceedings of the National Academy of Sciences of the United States of America, 119 (45) e2204993119, 1-12. doi: 10.1073/pnas.2204993119
Javati, Sarah, Guernier-Cambert, Vanina, Jonduo, Marinjho, Robby, Sinafa, Kimopa, Jobb, Maure, Tobias, McBryde, Emma S., Pomat, William, Aplin, Ken, Helgen, Kristofer M., Abdad, Mohammad Yazid and Horwood, Paul F. (2022). Diversity of Leptospira spp. in bats and rodents from Papua New Guinea. Transboundary and Emerging Diseases, 69 (6), 4048-4054. doi: 10.1111/tbed.14725
Ragonnet, Romain, Williams, Bridget M., Largen, Angela, Nasa, Joaquin, Jack, Tom, Langinlur, Mailynn K., Ko, Eunyoung, Rahevar, Kalpeshsinh, Islam, Tauhid, Denholm, Justin T., Marais, Ben J., Marks, Guy B., McBryde, Emma S. and Trauer, James M. (2022). Estimating the long-term effects of mass screening for latent and active tuberculosis in the Marshall Islands. International Journal of Epidemiology, 51 (5), 1433-1445. doi: 10.1093/ije/dyac045
Foster, J'Belle, Mendez, Diana, Marais, Ben J., Denholm, Justin T., Peniyamina, Dunstan and McBryde, Emma S. (2022). Critical consideration of tuberculosis management of Papua New Guinea nationals and cross-border health issues in the remote Torres Strait Islands, Australia. Tropical Medicine and Infectious Disease, 7 (9) 251, 1-12. doi: 10.3390/tropicalmed7090251
Kuddus, Md Abdul, McBryde, Emma S., Adekunle, Adeshina I., White, Lisa J. and Meehan, Michael T. (2022). Mathematical analysis of a two-strain tuberculosis model in Bangladesh. Scientific Reports, 12 (1) 3634, 1-13. doi: 10.1038/s41598-022-07536-2
Steinig, Eike, Duchêne, Sebastián, Aglua, Izzard, Greenhill, Andrew, Ford, Rebecca, Yoannes, Mition, Jaworski, Jan, Drekore, Jimmy, Urakoko, Bohu, Poka, Harry, Wurr, Clive, Ebos, Eri, Nangen, David, Manning, Laurens, Laman, Moses, Firth, Cadhla, Smith, Simon, Pomat, William, Tong, Steven Y. C, Coin, Lachlan, McBryde, Emma and Horwood, Paul (2022). Phylodynamic inference of bacterial outbreak parameters using nanopore sequencing. Molecular Biology and Evolution, 39 (3) msac040. doi: 10.1093/molbev/msac040
Kuddus, Md Abdul, McBryde, Emma S., Adekunle, Adeshina I. and Meehan, Michael T. (2022). Analysis and simulation of a two-strain disease model with nonlinear incidence. Chaos Solitons and Fractals, 155 111637, 1-10. doi: 10.1016/j.chaos.2021.111637
Dale, Katie D., Abayawardana, Milinda J., McBryde, Emma S., Trauer, James M. and Carvalho, Natalie (2022). Modeling the cost-effectiveness of latent tuberculosis screening and treatment strategies in recent migrants to a low-incidence setting. American Journal of Epidemiology, 191 (2), 255-270. doi: 10.1093/aje/kwab150
Pak, Anton, Adegboye, Oyelola A. and McBryde, Emma S. (2021). Are we better-off? The benefits and costs of Australian COVID-19 lockdown. Frontiers in Public Health, 9 798478, 798478. doi: 10.3389/fpubh.2021.798478
Jayasundara, Pavithra, Peariasamy, Kalaiarasu M., Law, Kian Boon, Abd Rahim, Ku Nurhasni Ku, Lee, Sit Wai, Ghazali, Izzuna Mudla M., Abayawardana, Milinda, Linh-Vi Le,, Khalaf, Rukun K. S., Razali, Karina, Le, Xuan, Chong, Zhuo Lin, McBryde, Emma S., Meehan, Michael T., Caldwell, Jamie M., Ragonnet, Romain and Trauer, James M. (2021). Sustaining effective COVID-19 control in Malaysia through large-scale vaccination. Epidemics, 37 100517, 1-10. doi: 10.1016/j.epidem.2021.100517
Trauer, James M., Kawai, Andrew, Coussens, Anna K., Datta, Manjula, Williams, Bridget M., McBryde, Emma S. and Ragonnet, Romain (2021). Timing of Mycobacterium tuberculosis exposure explains variation in BCG effectiveness: a systematic review and meta-analysis. Thorax, 76 (11), 1131-1141. doi: 10.1136/thoraxjnl-2020-216794
Trauer, James M., Lydeamore, Michael J., Dalton, Gregory W., Pilcher, David, Meehan, Michael T., McBryde, Emma S., Cheng, Allen C., Sutton, Brett and Ragonnet, Romain (2021). Understanding how Victoria, Australia gained control of its second COVID-19 wave. Nature Communications, 12 (1) 6266, 1-10. doi: 10.1038/s41467-021-26558-4
McBryde, Emma S., Meehan, Michael T., Caldwell, Jamie M., Adekunle, Adeshina I., Ogunlade, Samson T., Kuddus, Md Abdul, Ragonnet, Romain, Jayasundara, Pavithra, Trauer, James M. and Cope, Robert C. (2021). Modelling direct and herd protection effects of vaccination against the SARS-CoV-2 Delta variant in Australia. Medical Journal of Australia, 215 (9), 427-432. doi: 10.5694/mja2.51263
Pak, Anton, Adegboye, Oyelola A., Eisen, Damon P. and McBryde, Emma S. (2021). Hospitalisations related to lower respiratory tract infections in Northern Queensland. Australian and New Zealand Journal of Public Health, 45 (5), 430-436. doi: 10.1111/1753-6405.13104
Caldwell, Jamie M., Le, Xuan, McIntosh, Lorin, Meehan, Michael T., Ogunlade, Samson, Ragonnet, Romain, O'Neill, Genevieve K., Trauer, James M. and McBryde, Emma S. (2021). Vaccines and variants: Modelling insights into emerging issues in COVID-19 epidemiology. Paediatric Respiratory Reviews, 39, 32-39. doi: 10.1016/j.prrv.2021.07.002
Shaweno, Debebe, Trauer, James M., Doan, Tan N., Denholm, Justin T. and McBryde, Emma S. (2021). Geospatial clustering and modelling provide policy guidance to distribute funding for active TB case finding in Ethiopia. Epidemics, 36 100470, 1-7. doi: 10.1016/j.epidem.2021.100470
Caldwell, Jamie M., de Lara-Tuprio, Elvira, Robin Teng, Timothy, Estuar, Maria Regina Justina E., Sarmiento, Raymond Francis R., Abayawardana, Milinda, Leong, Robert Neil F., Gray, Richard T., Wood, James G., Linh-Vi Le,, McBryde, Emma S., Ragonnet, Romain and Trauer, James M. (2021). Understanding COVID-19 dynamics and the effects of interventions in the Philippines: A mathematical modelling study. Lancet Regional Health-Western Pacific, 14 100211, 1-9. doi: 10.1016/j.lanwpc.2021.100211
McQuaid, C. F., Clarkson, M. C., Bellerose, M., Floyd, K., White, R. G., Menzies, N. A., Ahmedov, S., Arinaminpathy, N., Bershteyn, A., Cheikh, N., Cobelens, F., Cohen, T., Dowdy, D., Eaton, J. W., Fiekert, K., Glaziou, P., Gomez, G. B., Hamilton, M., Hosseini, M., Houben, R. M.G.J., Kelly, S., Martin-Hughes, R., McBryde, E. S., Nguyen, A. T., Pretorius, C., Ragonnet, R., Resch, S. C., Rudman, J., Sanders, R. ... Zhang, S. (2021). An approach for improving the quality of country-level TB modelling. International Journal of Tuberculosis and Lung Disease, 25 (8), 614-619. doi: 10.5588/ijtld.21.0127
Adegboye, Oyelola A., McBryde, Emma S. and Eisen, Damon P. (2021). Tropical Australian health-data linkage shows excess mortality following severe infectious disease is present in the short-term and long-term after hospital discharge. Healthcare, 9 (7) 901, 1-10. doi: 10.3390/healthcare9070901
Ragonnet, Romain, Flegg, Jennifer A., Brilleman, Samuel L., Tiemersma, Edine W., Melsew, Yayehirad A., McBryde, Emma S. and Trauer, James M. (2021). Revisiting the natural history of pulmonary tuberculosis: A Bayesian estimation of natural recovery and mortality rates. Clinical Infectious Diseases, 73 (1), E88-E96. doi: 10.1093/cid/ciaa602
Estill, Janne, Islam, Tauhid, Houben, Rein M. G. J., Rudman, Jamie, Ragonnet, Romain, McBryde, Emma S., Trauer, James M., Orel, Erol, Nguyen, Anh Tuan, Rahevar, Kalpeshsinh, Morishita, Fukushi, Oh, Kyung Hyun, Raviglione, Mario C. and Keiser, Olivia (2021). Tuberculosis in the Western Pacific Region: Estimating the burden of disease and return on investment 2020-2030 in four countries. Lancet Regional Health-Western Pacific, 11 100147, 1-8. doi: 10.1016/j.lanwpc.2021.100147
Trauer, James M., Williams, Bridget, Laemmle-Ruff, Ingrid, Horyniak, Danielle, Caplice, Lila V. Soares, McBryde, Emma S., Majumdar, Suman S., Graham, Stephen M. and Hellard, Margaret E. (2021). Tuberculosis in migrants to Australia: Outcomes of a national screening program. Lancet Regional Health-Western Pacific, 10 100135, 1-8. doi: 10.1016/j.lanwpc.2021.100135
Pak, A., Eisen, D. P., McBryde, E. S. and Adegboye, O. A. (2021). Hospitalisation for lower respiratory tract infection is associated with an increased incidence of acute myocardial infarction and stroke in tropical Northern Australia. Scientific Reports, 11 (1) 6826, 1-8. doi: 10.1038/s41598-021-86301-3
Adegboye, Oyelola A., Adekunle, Adeshina, Pak, Anton, Gayawan, Ezra, Leung, Denis H. Y., Rojas, Diana P., Elfaki, Faiz, McBryde, Emma S. and Eisen, Damon P. (2021). Change in outbreak epicentre and its impact on the importation risks of COVID-19 progression: a modelling study. Travel Medicine and Infectious Disease, 40 101988, 101988. doi: 10.1016/j.tmaid.2021.101988
Kuddus, Md Abdul, Meehan, Michael T., Abu Sayem, Md. and McBryde, Emma S. (2021). Scenario analysis for programmatic tuberculosis control in Bangladesh: a mathematical modelling study. Scientific Reports, 11 (1) 4354, 1-17. doi: 10.1038/s41598-021-83768-y
Eisen, Damon P., Leder, Karin, Woods, Robyn L., Lockery, Jessica E., McGuinness, Sarah L., Wolfe, Rory, Pilcher, David, Moore, Elizabeth M., Shastry, Adithya, Nelson, Mark R., Reid, Christopher M., McNeil, John J. and McBryde, Emma S. (2021). Effect of aspirin on deaths associated with sepsis in healthy older people (ANTISEPSIS): a randomised, double-blind, placebo-controlled primary prevention trial. Lancet Respiratory Medicine, 9 (2), 186-195. doi: 10.1016/S2213-2600(20)30411-2
Kuddus, Md Abdul, McBryde, Emma S., Adekunle, Adeshina, White, Lisa J. and Meehan, Michael T. (2021). Mathematical analysis of a two-strain disease model with amplification. Chaos Solitons and Fractals, 143 110594, 1-10. doi: 10.1016/j.chaos.2020.110594
Pak, Anton, McBryde, Emma and Adegboye, Oyelola A. (2021). Does high public trust amplify compliance with stringent COVID-19 government health guidelines? A multi-country analysis using data from 102,627 individuals. Risk Management and Healthcare Policy, 14, 293-302. doi: 10.2147/rmhp.s278774
Ogunlade, Samson T., Meehan, Michael T., Adekunle, Adeshina I., Rojas, Diana P., Adegboye, Oyelola A. and McBryde, Emma S. (2021). A review: Aedes-borne arboviral infections, controls and Wolbachia-based strategies. Vaccines, 9 (1) 32, 1-23. doi: 10.3390/vaccines9010032
Foster, J'Belle, Marais, Ben, Martin, Rotona L., Peniyamina, Dunstan, Mendez, Diana, Warner, Jeffrey and McBryde, Emma (2021). Tuberculosis in the Torres Strait: the lady doth test too much. Rural and Remote Health, 21 (1) 6317, 1-8. doi: 10.22605/RRH6317
Trauer, James M., Marais, Ben J., Ragonnet, Romain, Savulescu, Julian and McBryde, Emma S. (2020). Time for a clear national COVID-19 strategy. Medical Journal of Australia, 214 (2), 94-94.e1. doi: 10.5694/mja2.50894
Wangdi, Kinley, Sarma, Haribondu, Leaburi, John, McBryde, Emma and Clements, Archie C. A. (2020). Evaluation of the malaria reporting system supported by the District Health Information System 2 in Solomon Islands. Malaria Journal, 19 (1) 372, 1-14. doi: 10.1186/s12936-020-03442-y
Ogunlade, Samson T., Adekunle, Adeshina I., Meehan, Michael T., Rojas, Diana P. and McBryde, Emma S. (2020). Modeling the potential of wAu-Wolbachia strain invasion in mosquitoes to control Aedes-borne arboviral infections. Scientific Reports, 10 (1) 16812, 1-16. doi: 10.1038/s41598-020-73819-1
McBryde, Emma S., Meehan, Michael T., Adegboye, Oyelola A., Adekunle, Adeshina, Caldwell, Jamie M., Pak, Anton, Rojas, Diana P., Williams, Bridget M. and Trauer, James M. (2020). Role of modelling in COVID-19 policy development. Paediatric Respiratory Reviews, 35, 57-60. doi: 10.1016/j.prrv.2020.06.013
Meehan, Michael T., Rojas, Diana P., Adekunle, Adeshina, Adegboye, Oyelola A., Caldwell, Jamie M., Turek, Evelyn, Williams, Bridget M., Marais, Ben J., Trauer, James M. and McBryde, Emma S. (2020). Modelling insights into the COVID-19 pandemic. Paediatric Respiratory Reviews, 35, 64-69. doi: 10.1016/j.prrv.2020.06.014
Price, David J., Shearer, Freya M., Meehan, Michael T., McBryde, Emma, Moss, Robert, Golding, Nick, Conway, Eamon J., Dawson, Peter, Cromer, Deborah, Wood, James, Abbott, Sam, McVernon, Jodie and McCaw, James M. (2020). Early analysis of the Australian COVID-19 epidemic. Elife, 9 e58785, 1-14. doi: 10.7554/eLife.58785
Thompson, Robin N., Hollingsworth, T. Deirdre, Isham, Valerie, Arribas-Bel, Daniel, Ashby, Ben, Britton, Tom, Challenor, Peter, Chappell, Lauren H. K., Clapham, Hannah, Cunniffe, Nik J., Dawid, A. Philip, Donnelly, Christl A., Eggo, Rosalind M., Funk, Sebastian, Gilbert, Nigel, Glendinning, Paul, Gog, Julia R., Hart, William S., Heesterbeek, Hans, House, Thomas, Keeling, Matt, Kiss, Istvan Z., Kretzschmar, Mirjam E., Lloyd, Alun L., McBryde, Emma S., McCaw, James M., McKinley, Trevelyan J., Miller, Joel C., Morris, Martina ... Restif, Olivier (2020). Key questions for modelling COVID-19 exit strategies. Proceedings of the Royal Society B-Biological Sciences, 287 (1932) 20201405, 1-15. doi: 10.1098/rspb.2020.1405
Kuddus, Md Abdul, Meehan, Michael T., White, Lisa J., McBryde, Emma S. and Adekunle, Adeshina (2020). Modeling drug-resistant tuberculosis amplification rates and intervention strategies in Bangladesh. PLoS One, 15 (7) e0236112, 1-26. doi: 10.1371/journal.pone.0236112
Adekunle, Adeshina, Meehan, Michael, Rojas-Alvarez, Diana, Trauer, James and McBryde, Emma (2020). Delaying the COVID-19 epidemic in Australia: evaluating the effectiveness of international travel bans. Australian and New Zealand Journal of Public Health, 44 (4), 257-259. doi: 10.1111/1753-6405.13016
Pak, Anton, Adegboye, Oyelola A., Adekunle, Adeshina I., Rahman, Kazi M., McBryde, Emma S. and Eisen, Damon P. (2020). Economic consequences of the COVID-19 outbreak: the need for epidemic preparedness. Frontiers in Public Health, 8 241. doi: 10.3389/fpubh.2020.00241
Fox, Gregory J., Trauer, James M. and McBryde, Emma (2020). Modelling the impact of COVID-19 on intensive care services in New South Wales. Medical Journal of Australia, 212 (10), 468-469. doi: 10.5694/mja2.50606
McBryde, Emma (2020). The value of early transmission dynamic studies in emerging infectious diseases. Lancet Infectious Diseases, 20 (5), 512-513. doi: 10.1016/S1473-3099(20)30161-4
Eisen, Damon P., McBryde, Emma S., Vasanthakumar, Luke, Murray, Matthew, Harings, Miriam and Adegboye, Oyelola (2020). Linking administrative data sets of inpatient infectious diseases diagnoses in far North Queensland: a cohort profile. BMJ Open, 10 (3) e034845, 1-8. doi: 10.1136/bmjopen-2019-034845
Melsew, Yayehirad A., Adekunle, Adeshina I., Cheng, Allen C., McBryde, Emma S., Ragonnet, Romain and Trauer, James M. (2020). Heterogeneous infectiousness in mathematical models of tuberculosis: A systematic review. Epidemics, 30 100374, 1-10. doi: 10.1016/j.epidem.2019.100374
Le, Thu T. K., Tran, Thuy T. B., Ho, Huong T. M., Vu, An T. L., McBryde, Emma and Lopata, Andreas L. (2020). The predominance of seafood allergy in Vietnamese adults: Results from the first population-based questionnaire survey. World Allergy Organization Journal, 13 (3) 100102, 1-12. doi: 10.1016/j.waojou.2020.100102
Meehan, Michael T., Cope, Robert C. and McBryde, Emma S. (2020). On the probability of strain invasion in endemic settings: Accounting for individual heterogeneity and control in multi-strain dynamics. Journal of Theoretical Biology, 487 110109, 1-12. doi: 10.1016/j.jtbi.2019.110109
Alene, Kefyalew Addis, Viney, Kerri, Gray, Darren J., McBryde, Emma S., Xu, Zuhui and Clements, Archie C. A. (2020). Development of a risk score for prediction of poor treatment outcomes among patients with multidrug-resistant tuberculosis. PLoS One, 15 (1) e0227100, 1-14. doi: 10.1371/journal.pone.0227100
Kuddus, Md Abdul, Tynan, Elizabeth and McBryde, Emma (2020). Urbanization: a problem for the rich and the poor?. Public Health Reviews, 41 (1) 1, 1-4. doi: 10.1186/s40985-019-0116-0
Adekunle, A. I., Adegboye, O. A., Gayawan, E. and McBryde, E. S. (2020). Is Nigeria really on top of COVID-19? Message from effective reproduction number. Epidemiology & Infection, 148 e166, 1-7. doi: 10.1017/S0950268820001740
Palagyi, Anna, Marais, Ben J., Abimbola, Seye, Topp, Stephanie M., McBryde, Emma S. and Negin, Joel (2019). Health system preparedness for emerging infectious diseases: A synthesis of the literature. Global Public Health, 14 (12), 1847-1868. doi: 10.1080/17441692.2019.1614645
Kuddus, Md Abdul, McBryde, Emma S. and Adegboye, Oyelola A. (2019). Delay effect and burden of weather-related tuberculosis cases in Rajshahi province, Bangladesh, 2007–2012. Scientific Reports, 9 (1) 12720, 1-13. doi: 10.1038/s41598-019-49135-8
Guernier-Cambert, Vanina, Diefenbach-Elstob, Tanya, Klotoe, Bernice J., Burgess, Graham, Pelowa, Daniel, Dowi, Robert, Gula, Bisato, McBryde, Emma S., Refrégier, Guislaine, Rush, Catherine, Sola, Christophe and Warner, Jeffrey (2019). Diversity of Mycobacterium tuberculosis in the Middle Fly District of Western Province, Papua New Guinea: microbead-based spoligotyping using DNA from Ziehl-Neelsen-stained microscopy preparations. Scientific Reports, 9 (1) 15549, 1-10. doi: 10.1038/s41598-019-51892-5
Ragonnet, Romain, Trauer, James M., Geard, Nicholas, Scott, Nick and McBryde, Emma S. (2019). Profiling Mycobacterium tuberculosis transmission and the resulting disease burden in the five highest tuberculosis burden countries. BMC Medicine, 17 (1) 208, 1-12. doi: 10.1186/s12916-019-1452-0
Doan, T. N., Varleva, T., Zamfirova, M., Tyufekchieva, M., Keshelava, A., Hristov, K., Yaneva, A., Gadzheva, B., Zhang, S., Irbe, S., Ragonnet, R., McBryde, E. S. and Trauer, J. M. (2019). Strategic investment in tuberculosis control in the Republic of Bulgaria. Epidemiology and infection, 147 e304, 1-10. doi: 10.1017/S0950268819001857
Melsew, Yayehirad A., Cheng, Allen C., McBryde, Emma S., Denholm, Justin T., Tay, EeLaine, Ragonnet, Romain and Trauer, James M. (2019). Profiles of tuberculosis disease activation among contacts of patients with tuberculosis. European Respiratory Journal, 54 (4) 1900353, 1-5. doi: 10.1183/13993003.00353-2019
Diefenbach-Elstob, Tanya, Guernier-Cambert, Vanina, Gula, Bisato, Dowi, Robert, Pelowa, Daniel, Pomat, William, Rush, Catherine, Plummer, David, McBryde, Emma and Warner, Jeffrey (2019). Spatial distribution of tuberculosis in a rural region of Western Province, Papua New Guinea. Western Pacific Surveillance and Response, 10 (4), 1-8. doi: 10.5365/wpsar.2019.10.2.001
Wejse, Christian, Ragonnet, Romain, McBryde, Emma S. and Trauer, James M. (2019). Modelling tuberculosis control priorities: more of the same will not do. The Lancet Global Health, 7 (10), e1319-e1319. doi: 10.1016/S2214-109X(19)30286-4
Alene, Kefyalew Addis, Viney, Kerri, McBryde, Emma S., Gray, Darren J., Melku, Mulugeta and Clements, Archie C. A. (2019). Risk factors for multidrug-resistant tuberculosis in northwest Ethiopia: A case–control study. Transboundary and Emerging Diseases, 66 (4) tbed.13188, 1611-1618. doi: 10.1111/tbed.13188
Trauer, James M., Dodd, Peter J., Gomes, M. Gabriela M., Gomez, Gabriela B., Houben, Rein M. G. J., McBryde, Emma S., Melsew, Yayehirad A., Menzies, Nicolas A., Arinaminpathy, Nimalan, Shrestha, Sourya and Dowdy, David W. (2019). The importance of heterogeneity to the epidemiology of tuberculosis. Clinical Infectious Diseases, 69 (1), 159-166. doi: 10.1093/cid/ciy938
Alene, Kefyalew Addis, Viney, Kerri, Gray, Darren J., McBryde, Emma S., Wagnew, Maereg and Clements, Archie C. A. (2019). Mapping tuberculosis treatment outcomes in Ethiopia. BMC Infectious Diseases, 19 (1) 474, 1-11. doi: 10.1186/s12879-019-4099-8
Meehan, Michael T., Cocks, Daniel G., Müller, Johannes and McBryde, Emma S. (2019). Global stability properties of a class of renewal epidemic models. Journal of Mathematical Biology, 78 (6), 1713-1725. doi: 10.1007/s00285-018-01324-1
Doyle, Joseph S., Scott, Nick, Sacks-Davis, Rachel, Pedrana, Alisa E., Thompson, Alex, Hellard, Margaret, Dietze, Paul, McBryde, Emma, Sievert, William, Stoove, Mark, Higgs, Peter, Petrie, Denis and Vickerman, Peter (2019). Treatment access is only the first step to hepatitis C elimination: experience of universal anti-viral treatment access in Australia. Alimentary Pharmacology and Therapeutics, 49 (9), 1223-1229. doi: 10.1111/apt.15210
Ragonnet, Romain, Underwood, Frank, Doan, Tan, Rafai, Eric, Trauer, James and McBryde, Emma (2019). Strategic planning for tuberculosis control in the Republic of Fiji. Tropical Medicine and Infectious Disease, 4 (2) 71, 1-12. doi: 10.3390/tropicalmed4020071
Melsew, Yayehirad A., Gambhir, Manoj, Cheng, Allen C., McBryde, Emma S., Denholm, Justin T., Tay, Ee Laine and Trauer, James M. (2019). The role of super-spreading events in Mycobacterium tuberculosis transmission: Evidence from contact tracing. BMC Infectious Diseases, 19 (1) 244, 19. doi: 10.1186/s12879-019-3870-1
Bainomugisa, Arnold, Pandey, Sushi, Donnan, Ellen, Simpson, Graham, Foster, J'Belle, Lavu, Evelyn, Hiasihri, Stenard, McBryde, Emma S., Moke, Rendi, Vincent, Steven, Sintchenko, Vitali, Marais, Ben J., Coin, Lachlan J. M. and Coulter, Christopher (2019). Cross-border movement of highly drug-resistant Mycobacterium tuberculosis from Papua New Guinea to Australia through Torres Strait Protected Zone, 2010-2015. Emerging Infectious Diseases, 25 (3), 406-415. doi: 10.3201/eid2503.181003
Diefenbach-Elstob, Tanya, Guernier, Vanina, Burgess, Graham, Pelowa, Daniel, Dowi, Robert, Gula, Bisato, Puri, Munish, Pomat, William, McBryde, Emma, Plummer, David, Rush, Catherine and Warner, Jeffrey (2019). Molecular evidence of drug-resistant tuberculosis in the Balimo region of Papua New Guinea. Tropical Medicine and Infectious Disease, 4 (1) 33, 33-1. doi: 10.3390/tropicalmed4010033
Adekunle, Adeshina I., Meehan, Michael T. and McBryde, Emma S. (2019). Mathematical analysis of a Wolbachia invasive model with imperfect maternal transmission and loss of Wolbachia infection. Infectious Disease Modelling, 4, 265-285. doi: 10.1016/j.idm.2019.10.001
Clifford, Vanessa, Tebruegge, Marc, Zufferey, Christel, Germano, Susie, Forbes, Ben, Cosentino, Lucy, Matchett, Elizabeth, McBryde, Emma, Eisen, Damon, Robins-Browne, Roy, Street, Alan, Denholm, Justin and Curtis, Nigel (2019). Cytokine biomarkers for the diagnosis of tuberculosis infection and disease in adults in a low prevalence setting. Tuberculosis, 114, 91-102. doi: 10.1016/j.tube.2018.08.011
Doan, Tan N., Fox, Greg J., Meehan, Michael T., Scott, Nick, Ragonnet, Romain, Viney, Kerri, Trauer, James M. and McBryde, Emma S. (2019). Cost-effectiveness of 3 months of weekly rifapentine and isoniazid compared with other standard treatment regimens for latent tuberculosis infection: A decision analysis study. Journal of Antimicrobial Chemotherapy, 74 (1), 218-227. doi: 10.1093/jac/dky403
Doan, Tan N., Cao, Pengxing, Emeto, Theophilus I., McCaw, James M. and McBryde, Emma S. (2018). Predicting the outcomes of new short-course regimens for multidrug-resistant tuberculosis using intrahost and pharmacokinetic-pharmacodynamic modeling. Antimicrobial Agents and Chemotherapy, 62 (12) e01487-18, 1-11. doi: 10.1128/AAC.01487-18
Alene, Kefyalew Addis, Clements, Archie C. A., McBryde, Emma S., Jaramillo, Ernesto, Lönnroth, Knut, Shaweno, Debebe, Gulliver, Amelia and Viney, Kerri (2018). Mental health disorders, social stressors, and health-related quality of life in patients with multidrug-resistant tuberculosis: A systematic review and meta-analysis. Journal of Infection, 77 (5), 357-367. doi: 10.1016/j.jinf.2018.07.007
Shaweno, Debebe, Karmakar, Malancha, Alene, Kefyalew Addis, Ragonnet, Romain, Clements, Archie Ca, Trauer, James M., Denholm, Justin T. and McBryde, Emma S. (2018). Methods used in the spatial analysis of tuberculosis epidemiology: A systematic review. BMC Medicine, 16 (1) 193, 1-18. doi: 10.1186/s12916-018-1178-4
Cheah, Agnes Loo Yee, Cheng, Allen C., Spelman, Denis, Nation, Roger L., Kong, David C. M. and McBryde, Emma S. (2018). Mathematical modelling of vancomycin-resistant enterococci transmission during passive surveillance and active surveillance with contact isolation highlights the need to identify and address the source of acquisition. BMC Infectious Diseases, 18 (1) 511, 511-18. doi: 10.1186/s12879-018-3388-y
Horwood, Paul F., McBryde, Emma S., Peniyamina, Dunstan and Ritchie, Scott A. (2018). The Indo-Papuan conduit: a biosecurity challenge for Northern Australia. Australian and New Zealand Journal of Public Health, 42 (5), 434-436. doi: 10.1111/1753-6405.12808
Foster, J., McBryde, E., Taune, M. and Peniyamina, D. (2018). Cross-border tuberculosis: Opportunities, challenges and change. International Journal of Tuberculosis and Lung Disease, 22 (9), 1107-1108. doi: 10.5588/ijtld.18.0275
Diefenbach-Elstob, Tanya, Graves, Patricia, Dowi, Robert, Gula, Bisato, Plummer, David, McBryde, Emma, Pelowa, Daniel, Siba, Peter, Pomat, William and Warner, Jeffrey (2018). The epidemiology of tuberculosis in the rural Balimo region of Papua New Guinea. Tropical Medicine and International Health, 23 (9), 1022-1032. doi: 10.1111/tmi.13118
Shaweno, Debebe, Trauer, James M., Denholm, Justin T. and McBryde, Emma S. (2018). The role of geospatial hotspots in the spatial spread of tuberculosis in rural Ethiopia: A mathematical model. Royal Society Open Science, 5 (9) 180887, 180887-9. doi: 10.1098/rsos.180887
Trauer, James M, Ragonnet, Romain and McBryde, Emma S (2018). Appropriate comparisons of tuberculosis latency structures with empiric data. The Lancet Infectious Diseases, 18 (7), 720-721. doi: 10.1016/S1473-3099(18)30339-6
Wu, Yue, Marsh, Julie A., McBryde, Emma S. and Snelling, Thomas L. (2018). The influence of incomplete case ascertainment on measures of vaccine efficacy. Vaccine, 36 (21), 2946-2952. doi: 10.1016/j.vaccine.2018.04.046
Alene, Kefyalew Addis, Viney, Kerri, Yi, Hengzhong, McBryde, Emma S., Yang, Kunyun, Bai, Liqiong, Gray, Darren J., Xu, Zuhui and Clements, Archie C. A. (2018). Comparison of the validity of smear and culture conversion as a prognostic marker of treatment outcome in patients with multidrug-resistant tuberculosis. PLoS ONE, 13 (5) e0197880, e0197880-5. doi: 10.1371/journal.pone.0197880
Alene, Kefyalew Addis, Clements, Archie C A, McBryde, Emma S, Jaramillo, Ernesto, Lonnroth, Knut, Shaweno, Debebe and Viney, Kerri (2018). Sequelae of multidrug-resistant tuberculosis: protocol for a systematic review and meta-analysis. BMJ Open, 8 (2) e019593, 2. doi: 10.1136/bmjopen-2017-019593
Denholm, Justin T., McBryde, Emma S., Eisen, Damon, Street, Alan, Matchett, Elizabeth, Chen, Caroline, Schulz, Thomas Ray, Biggs, Beverly and Leder, Karin (2018). SIRCLE: a randomized controlled cost comparison of self-administered short-course isoniazid and rifapentine for cost-effective latent tuberculosis eradication (vol 47, pg 1433, 2017). Internal Medicine Journal, 48 (4), 488-488. doi: 10.1111/imj.13763
Meehan, Michael T., Cocks, Daniel G., Trauer, James M. and McBryde, Emma S. (2018). Coupled, multi-strain epidemic models of mutating pathogens. Mathematical Biosciences, 296, 82-92. doi: 10.1016/j.mbs.2017.12.006
Guernier, Vanina, Diefenbach-Elstob, Tanya, Pelowa, Daniel, Pollard, Sandra, Burgess, Graham, McBryde, Emma S. and Warner, Jeffrey (2018). Molecular diagnosis of suspected tuberculosis from archived smear slides from the Balimo region, Papua New Guinea. International Journal of Infectious Diseases, 67, 75-81. doi: 10.1016/j.ijid.2017.12.004
Melsew, Y. A., Doan, T. N., Gambhir, M., Cheng, A. C., McBryde, E. and Trauer, J. M. (2018). Risk factors for infectiousness of patients with tuberculosis: A systematic review and meta-analysis. Epidemiology and Infection, 146 (3), 345-353. doi: 10.1017/S0950268817003041
van Gemert, Caroline, McBryde, Emma S., Bergeri, Isabel, Sacks-Davis, Rachel, Vally, Hassan, Spelman, Tim, Sutton, Brett and Hellard, Margaret (2018). Description of social contacts among student cases of pandemic influenza during the containment phase, Melbourne, Australia, 2009. Western Pacific Surveillance and Response, 9 (5), 27-34. doi: 10.5365/wpsar.2018.9.5.003
Ragonnet, Romain, Trauer, James M., Scott, Nick, Meehan, Michael T., Denholm, Justin T. and McBryde, Emma S. (2017). Optimally capturing latency dynamics in models of tuberculosis transmission. Epidemics, 21, 39-47. doi: 10.1016/j.epidem.2017.06.002
Denholm, Justin T., McBryde, Emma S., Eisen, Damon, Street, Alan, Matchett, Elizabeth, Chen, Caroline, Shultz, Thomas, Biggs, Beverly and Leder, Karin (2017). SIRCLE: a randomised controlled cost comparison of self-administered short-course isoniazid and rifapentine for cost-effective latent tuberculosis eradication. Internal Medicine Journal, 47 (12), 1433-1436. doi: 10.1111/imj.13601
Trauer, James, Muhi, Stephen, McBryde, Emma S., Al Harbi, Shmeylan A., Arabi, Yaseen M., Boyle, Andrew J., Cartin-Ceba, Rodrigo, Chen, Wei, Chen, Yung-Tai, Falcone, Marco, Gajic, Ognjen, Godsell, Jack, Gong, Michelle Ng, Kor, Daryl, Lösche, Wolfgang, McAuley, Daniel F., O'Neal, Hollis R., Osthoff, Michael, Otto, Gordon P., Sossdorf, Maik, Tsai, Min-Juei, Valerio-Rojas, Juan C., Van Der Poll, Tom, Violi, Francesco, Ware, Lorraine, Widmer, Andreas F., Wiewel, Maryse A., Winning, Johannes and Eisen, Damon P. (2017). Quantifying the effects of prior acetyl-salicylic acid on sepsis-related deaths: An individual patient data meta-analysis using propensity matching. Critical Care Medicine, 45 (11), 1871-1879. doi: 10.1097/CCM.0000000000002654
Dimasuay, Kris Genelyn, Gong, Lan, Rosario, Fredrick, McBryde, Emma, Spelman, Tim, Glazier, Jocelyn, Rogerson, Stephen J., Beeson, James G., Jansson, Thomas, Devenish, Rodney J. and Boeuf, Philippe (2017). Impaired placental autophagy in placental malaria. PLoS ONE, 12 (11) e0187291, e0187291. doi: 10.1371/journal.pone.0187291
Doan, Tan N., Eisen, Damon P., Rose, Morgan T., Slack, Andrew, Stearnes, Grace and McBryde, Emma S. (2017). Interferon-gamma release assay for the diagnosis of latent tuberculosis infection: A latent-class analysis. PLoS ONE, 12 (11) e0188631, e0188631. doi: 10.1371/journal.pone.0188631
Shaweno, Debebe, Trauer, James M., Denholm, Justin T. and McBryde, Emma S. (2017). A novel Bayesian geospatial method for estimating tuberculosis incidence reveals many missed TB cases in Ethiopia. BMC Infectious Diseases, 17 (1) 662. doi: 10.1186/s12879-017-2759-0
Alene, Kefyalew Addis, Yi, Hengzhong, Viney, Kerri, McBryde, Emma S., Yang, Kunyun, Bai, Liqiong, Gray, Darren J., Clements, Archie C.A. and Xu, Zuhui (2017). Treatment outcomes of patients with multidrug-resistant and extensively drug resistant tuberculosis in Hunan Province, China. BMC Infectious Diseases, 17 (1) 573. doi: 10.1186/s12879-017-2662-8
Trauer, James McCracken, Ragonnet, Romain, Doan, Tan Nhut and McBryde, Emma Sue (2017). Modular programming for tuberculosis control, the "AuTuMN" platform. BMC Infectious Diseases, 17 (1) 546. doi: 10.1186/s12879-017-2648-6
Clifford, Vanessa, Tebruegge, Marc, Zufferey, Christel, Germano, Susie, Forbes, Ben, Cosentino, Lucy, McBryde, Emma, Eisen, Damon, Robins-Browne, Roy, Street, Alan, Denholm, Justin and Curtis, Nigel (2017). Mycobacteria-specific cytokine responses as correlates of treatment response in active and latent tuberculosis. Journal of Infection, 75 (2), 132-145. doi: 10.1016/j.jinf.2017.04.011
Scott, Nick, McBryde, Emma S, Thompson, Alexander, Doyle, Joseph S and Hellard, Margaret E (2017). Treatment scale-up to achieve global HCV incidence and mortality elimination targets: A cost-effectiveness model. Gut, 66 (8), 1507-1515. doi: 10.1136/gutjnl-2016-311504
Ragonnet, Romain, Trauer, James M., Denholm, Justin T., Marais, Ben J. and McBryde, Emma S. (2017). A user-friendly mathematical modelling web interface to assist local decision making in the fight against drug-resistant tuberculosis. BMC Infectious Diseases, 17 (1) 374. doi: 10.1186/s12879-017-2478-6
Wilkinson, Anna L., El-Hayek, Carol, Fairley, Christopher K., Roth, Norm, Tee, B. K., McBryde, Emma, Hellard, Margaret and Stoové, Mark (2017). Wilkinson et al. Respond to "Latent transition analyses in clinical cohorts". American Journal of Epidemiology, 185 (8), 639-640. doi: 10.1093/aje/kww238
Wilkinson, Anna L., El-Hayek, Carol, Fairley, Christopher K., Roth, Norm, Tee, B. K., McBryde, Emma, Hellard, Margaret and Stoové, Mark (2017). Measuring transitions in sexual risk among men who have sex with men: the novel use of latent class and latent transition analysis in HIV sentinel surveillance. American Journal of Epidemiology, 185 (8), 627-635. doi: 10.1093/aje/kww239
McBryde, Emma S., Meehan, Michael T., Doan, Tan N., Ragonnet, Romain, Marais, Ben J., Guernier, Vanina and Trauer, James M. (2017). The risk of global epidemic replacement with drug-resistant Mycobacterium tuberculosis strains. International Journal of Infectious Diseases, 56, 14-20. doi: 10.1016/j.ijid.2017.01.031
Alene, Kefyalew Addis, Viney, Kerri, McBryde, Emma S., Tsegaye, Adino Tesfahun and Clements, Archie C. A. (2017). Treatment outcomes in patients with multidrug-resistant tuberculosis in north-west Ethiopia. Tropical Medicine and International Health, 22 (3), 351-362. doi: 10.1111/tmi.12826
Alene, Kefyalew Addis, Viney, Kerri, McBryde, Emma S. and Clements, Archie C. A. (2017). Spatial patterns of multidrug resistant tuberculosis and relationships to socioeconomic, demographic and household factors in northwest Ethiopia. PLoS ONE, 12 (2) e0171800, e0171800. doi: 10.1371/journal.pone.0171800
Ragonnet, Romain, Trauer, James M., Denholm, Justin T., Marais, Ben J. and McBryde, Emma S. (2017). High rates of multidrug-resistant and rifampicin-resistant tuberculosis among re-treatment cases: Where do they come from?. BMC Infectious Diseases, 17 (1) 36. doi: 10.1186/s12879-016-2171-1
Eisen, Damon P., Moore, Elizabeth M., Leder, Karin, Lockery, Jessica, McBryde, Emma S., McNeil, John J., Pilcher, David, Wolfe, Rory and Woods, Robyn L. (2017). AspiriN To Inhibit SEPSIS (ANTISEPSIS) randomised controlled trial protocol. BMJ Open, 7 (1) e013636. doi: 10.1136/bmjopen-2016-013636
Shaweno, Debebe, Shaweno, T., Trauer, J. M., Denholm, J. T. and McBryde, E. S. (2017). Heterogeneity of distribution of tuberculosis in Sheka Zone, Ethiopia: Drivers and temporal trends. International Journal of Tuberculosis and Lung Disease, 21 (1). doi: 10.5588/ijtld.16.0325
Ragonnet, Romain, Trauer, J. M., McBryde, E. S., Houben, R. M.G.J., Denholm, J. T., Handel, A. and Sumner, T. (2017). Is IPT more effective in high-burden settings? Modelling the effect of tuberculosis incidence on IPT impact. International Journal of Tuberculosis and Lung Disease, 21 (1). doi: 10.5588/ijtld.16.0297
Horwood, Paul F., Soli, Kevin W., Maure, Tobias, Naito, Yuichi I., Morita, Ayako, Natsuhara, Kazumi, Tadokoro, Kiyoshi, Baba, Jun, Odani, Shingo, Tomitsuka, Eriko, Igai, Katsura, Larkins, Jo-Ann, Siba, Peter M., Pomat, William, McBryde, Emma S., Umezaki, Masahiro and Greenhill, Andrew R. (2017). A high burden of asymptomatic gastrointestinal infections in traditional communities in Papua New Guinea. American Journal of Tropical Medicine and Hygiene, 97 (6), 1872-1875. doi: 10.4269/ajtmh.17-0282
Alene, Kefyalew Addis, Viney, Kerri, McBryde, Emma S. and Clements, Archie C. A. (2017). Spatiotemporal transmission and socio-climatic factors related to paediatric tuberculosis in north-Western Ethiopia. Geospatial Health, 12 (2) 575, 342-350. doi: 10.4081/gh.2017.575
Playford, E. Geoffrey, Lipman, Jeffrey, Jones, Michael, Lau, Anna F., Kabir, Masrura, Chen, Sharon C. -A., Marriott, Deborah J., Seppelt, Ian, Gottlieb, Thomas, Cheung, Winston, Iredell, Jonathan R., McBryde, Emma S. and Sorrell, Tania C. (2016). Problematic dichotomization of risk for Intensive Care Unit (ICU)-acquired invasive candidiasis: results using a risk-predictive model to categorize 3 levels of risk from a multicenter prospective cohort of Australian ICU patients. Clinical Infectious Diseases, 63 (11), 1463-1469. doi: 10.1093/cid/ciw610
Trauer, James M., Achar, Jay, Parpieva, Nargiza, Khamraev, Atadjan, Denholm, Justin T., Falzon, Dennis, Jaramillo, Ernesto, Mesic, Anita, du Cros, Philipp and McBryde, Emma S. (2016). Modelling the effect of short-course multidrug-resistant tuberculosis treatment in Karakalpakstan, Uzbekistan. BMC Medicine, 14 (1) 187. doi: 10.1186/s12916-016-0723-2
Menzies, Nicolas A., Gomez, Gabriela B., Bozzani, Fiammetta, Chatterjee, Susmita, Foster, Nicola, Baena, Ines Garcia, Laurence, Yoko V., Qiang, Sun, Siroka, Andrew, Sweeney, Sedona, Verguet, Stéphane, Arinaminpathy, Nimalan, Azman, Andrew S., Bendavid, Eran, Chang, Stewart T., Cohen, Ted, Denholm, Justin T., Dowdy, David W., Eckhoff, Philip A., Goldhaber-Fiebert, Jeremy D., Handel, Andreas, Huynh, Grace H., Lalli, Marek, Lin, Hsien-Ho, Mandal, Sandip, McBryde, Emma S., Pandey, Surabhi, Salomon, Joshua A., Suen, Sze-chuan ... Vassall, Anna (2016). Cost-effectiveness and resource implications of aggressive action on tuberculosis in China, India, and South Africa: a combined analysis of nine models. The Lancet Global Health, 4 (11), e816-e826. doi: 10.1016/S2214-109X(16)30265-0
Houben, Rein M. G. J., Menzies, Nicolas A., Sumner, Tom, Huynh, Grace H., Arinaminpathy, Nimalan, Goldhaber-Fiebert, Jeremy D., Lin, Hsien-Ho, Wu, Chieh-Yin, Mandal, Sandip, Pandey, Surabhi, Suen, Sze-chuan, Bendavid, Eran, Azman, Andrew S., Dowdy, David W., Bacaër, Nicolas, Rhines, Allison S., Feldman, Marcus W., Handel, Andreas, Whalen, Christopher C., Chang, Stewart T., Wagner, Bradley G., Eckhoff, Philip A., Trauer, James M., Denholm, Justin T., McBryde, Emma S., Cohen, Ted, Salomon, Joshua A., Pretorius, Carel, Lalli, Marek ... White, Richard G. (2016). Feasibility of achieving the 2025 WHO global tuberculosis targets in South Africa, China, and India: a combined analysis of 11 mathematical models. The Lancet Global Health, 4 (11), e806-e815. doi: 10.1016/S2214-109X(16)30199-1
Moss, Robert, Hickson, Roslyn I., McVernon, Jodie, McCaw, James M., Hort, Krishna, Black, Jim, Madden, John R., Tran, Nhi H., McBryde, Emma S. and Geard, Nicholas (2016). Model-Informed Risk Assessment and Decision Making for an Emerging Infectious Disease in the Asia-Pacific Region. PLoS Neglected Tropical Diseases, 10 (9) e0005018, e0005018. doi: 10.1371/journal.pntd.0005018
Wilkinson, Anna L., El-Hayek, Carol, Spelman, Tim, Fairley, Christopher K., Leslie, David, Mcbryde, Emma S., Hellard, Margaret and Stoové, Mark (2016). A 'test and treat' prevention strategy in Australia requires innovative HIV testing models: A cohort study of repeat testing among high-risk' men who have sex with men. Sexually Transmitted Infections, 92 (6), 464-466. doi: 10.1136/sextrans-2015-052421
Trauer, James M., Denholm, Justin T., Waseem, Saba, Ragonnet, Romain and McBryde, Emma S. (2016). Scenario analysis for programmatic tuberculosis control in Western Province, Papua New Guinea. American Journal of Epidemiology, 183 (12), 1138-1148. doi: 10.1093/aje/kwv323
Stone, Jack, Martin, Natasha K., Hickman, Matthew, Hellard, Margaret, Scott, Nick, McBryde, Emma, Drummer, Heidi and Vickerman, Peter (2016). The potential impact of a hepatitis C vaccine for people who inject drugs: Is a vaccine needed in the age of direct-acting antivirals?. PLoS ONE, 11 (5) e0156213. doi: 10.1371/journal.pone.0156213
Scott, Nick, Hellard, Margaret and McBryde, Emma Sue (2016). Modeling hepatitis C virus transmission among people who inject drugs: Assumptions, limitations and future challenges. Virulence, 7 (2), 201-208. doi: 10.1080/21505594.2015.1085151
Doan, Tan N., Kong, David C.M., Marshall, Caroline, Kirkpatrick, Carl M.J. and McBryde, Emma S. (2016). Modeling the impact of interventions against Acinetobacter baumannii transmission in intensive care units. Virulence, 7 (2), 141-152. doi: 10.1080/21505594.2015.1076615
Trauer, James M., Moyo, Nompilo, Tay, Ee-Laine, Dale, Katie, Ragonnet, Romain, McBryde, Emma S. and Denholm, Justin T. (2016). Risk of active tuberculosis in the five years following infection ⋯ 15%?. Chest, 149 (2), 516-525. doi: 10.1016/j.chest.2015.11.017
Clifford, Vanessa, Tebruegge, Marc, Zufferey, Christel, Germano, Susie, Denholm, Justin, Street, Alan, McBryde, Emma, Eisen, Damon and Curtis, Nigel (2015). Serum IP-10 in the diagnosis of latent and active tuberculosis. Journal of Infection, 71 (6), 696-698. doi: 10.1016/j.jinf.2015.08.001
Geard, Nicholas, Glass, Kathryn, McCaw, James M., McBryde, Emma S., Korb, Kevin B., Keeling, Matt J. and McVernon, Jodie (2015). The effects of demographic change on disease transmission and vaccine impact in a household structured population. Epidemics, 13, 56-64. doi: 10.1016/j.epidem.2015.08.002
Scott, Nick, McBryde, Emma, Kirwan, Amy and Stoové, Mark (2015). Modelling the impact of condom distribution on the incidence and prevalence of sexually transmitted infections in an adult male prison system. PLoS ONE, 10 (12) e0144869. doi: 10.1371/journal.pone.0144869
Rolls, David A., Wang, Peng, McBryde, Emma, Pattison, Philippa and Robins, Garry (2015). A simulation study comparing epidemic dynamics on exponential random graph and edge-Triangle configuration type contact network models. PLoS ONE, 10 (11) e0142181. doi: 10.1371/journal.pone.0142181
Ragonnet, Romain, Trauer, James M., Denholm, Justin T., Geard, Nicholas L., Hellard, Margaret and McBryde, Emma S. (2015). Vaccination Programs for Endemic Infections: Modelling Real versus Apparent Impacts of Vaccine and Infection Characteristics. Scientific Reports, 5 15468. doi: 10.1038/srep15468
Hellard, Margaret, McBryde, Emma, Sacks Davis, Rachel, Rolls, David A., Higgs, Peter, Aitken, Campbell, Thompson, Alex, Doyle, Joe, Pattison, Pip and Robins, Garry (2015). Hepatitis C transmission and treatment as prevention - The role of the injecting network. International Journal of Drug Policy, 26 (10), 958-962. doi: 10.1016/j.drugpo.2015.05.006
Scott, Nick, McBryde, Emma, Vickerman, Peter, Martin, Natasha K., Stone, Jack, Drummer, Heidi and Hellard, Margaret (2015). The role of a hepatitis C virus vaccine: Modelling the benefits alongside direct-acting antiviral treatments. BMC Medicine, 13 (1) 198. doi: 10.1186/s12916-015-0440-2
Eisen, Damon P. and McBryde, Emma S. (2015). An Association between Aspirin Use in Human Cases of Infective Endocarditis and Reduced Systemic Embolism Is Shown in Meta-analysis of Observational Studies. Journal of Infectious Diseases, 212 (4), 673-674. doi: 10.1093/infdis/jiv131
Doan, Tan N., Kong, David C.M., Marshall, Caroline, Kirkpatrick, Carl M.J. and McBryde, Emma S. (2015). Characterising the transmission dynamics of Acinetobacter baumannii in intensive care units using hidden markov models. PLoS ONE, 10 (7) e0132037. doi: 10.1371/journal.pone.0132037
Lau, Anna F, Kabir, Masrura, Chen, Sharon C-A, Playford, E. Geoffrey, Marriott, Deborah J, Jones, Michael, Lipman, Jeffrey, McBryde, Emma, Gottlieb, Thomas, Cheung, Winston, Seppelt, Ian, Iredell, Jonathan and Sorrella, Tania C (2015). Candida colonization as a risk marker for invasive candidiasis in mixed medical-surgical intensive care units: Development and evaluation of a simple, standard protocol. Journal of Clinical Microbiology, 53 (4), 1324-1330. doi: 10.1128/JCM.03239-14
Sacks-Davis, Rachel, McBryde, Emma, Grebely, Jason, Hellard, Margaret and Vickerman, Peter (2015). Many hepatitis C reinfections that spontaneously clear may be undetected: Markov-chain Monte Carlo analysis of observational study data. Journal of the Royal Society Interface, 12 (104) 20141197. doi: 10.1098/rsif.2014.1197
Harris, Patrick N. A., Peleg, Anton Y., Iredell, Jon, Ingram, Paul R., Miyakis, Spiros, Stewardson, Andrew J., Rogers, Benjamin A., McBryde, Emma S., Roberts, Jason A., Lipman, Jeff, Athan, Eugene, Paul, Sanjoy K., Baker, Peter, Harris-Brown, Tiffany and Paterson, David L. (2015). Meropenem versus piperacillin-tazobactam for definitive treatment of bloodstream infections due to ceftriaxone non-susceptible Escherichia coli and Klebsiella spp (the MERINO trial): study protocol for a randomised controlled trial. Trials, 16 (1) 24, 24.1-24.8. doi: 10.1186/s13063-014-0541-9
Meumann, Ella M., Mitchell, Brett G., McGregor, Alistair, McBryde, Emma and Cooley, Louise (2015). Urinary Escherichia coli antimicrobial susceptibility profiles and their relationship with community antibiotic use in Tasmania, Australia. International Journal of Antimicrobial Agents, 46 (4), 389-393. doi: 10.1016/j.ijantimicag.2015.05.015
Wilkinson, Anna Lee, El-Hayek, Carol, Spelman, Tim, Fairley, Christopher, Leslie, David, McBryde, Emma, Hellard, Margaret and Stoové, Mark (2015). "seek, test, treat" lessons from Australia: A study of HIV testing patterns from a cohort of men who have sex with men. Journal of Acquired Immune Deficiency Syndromes, 69 (4), 460-465. doi: 10.1097/QAI.0000000000000613
Hellard, Margaret, Rolls, David A, Sacks-Davis, Rachel, Robins, Garry, Pattison, Philippa, Higgs, Peter, Aitken, Campbell and Mcbryde, Emma (2014). The impact of injecting networks on hepatitis C transmission and treatment in people who inject drugs. Hepatology, 60 (6), 1861-1870. doi: 10.1002/hep.27403
Doyle, Joseph S., Degenhardt, Louisa, Pedrana, Alisa E., McBryde, Emma S., Guy, Rebecca J., Stoové, Mark A., Weaver, Emma R., Grulich, Andrew E., Lo, Ying-Ru and Hellard, Margaret E. (2014). Effects of HIV antiretroviral therapy on sexual and injecting risk-taking behavior: A systematic review and meta-analysis. Clinical Infectious Diseases, 59 (10), 1483-1494. doi: 10.1093/cid/ciu602
Denholm, Justin T., McBryde, Emma S., Eisen, Damon P., Penington, Jocelyn S., Chen, Caroline and Street, Alan C. (2014). Adverse effects of isoniazid preventative therapy for latent tuberculosis infection: A prospective cohort study. Drug, Healthcare and Patient Safety, 6, 145-149. doi: 10.2147/DHPS.S68837
Trauer, James M., Denholm, Justin T. and McBryde, Emma S. (2014). Construction of a mathematical model for tuberculosis transmission in highly endemic regions of the Asia-pacific. Journal of Theoretical Biology, 358, 74-84. doi: 10.1016/j.jtbi.2014.05.023
Schulz, Thomas R., McBryde, Emma S., Leder, Karin and Biggs, Beverley-Ann (2014). Using stool antigen to screen for helicobacter pylori in immigrants and refugees from high prevalence countries is relatively cost effective in reducing the burden of gastric cancer and peptic ulceration. PLoS ONE, 9 (9) e108610. doi: 10.1371/journal.pone.0108610
Marshall, Caroline and McBryde, Emma (2014). The role of Staphylococcus aureus carriage in the pathogenesis of bloodstream infection. BMC Research Notes, 7 (1) 428. doi: 10.1186/1756-0500-7-428
Cross, Gail B., Coles, Katie, Nikpour, Mandana, Moore, Owen A., Denholm, Justin, McBryde, Emma S., Eisen, Damon P., Warigi, Beverlyn, Carter, Robyn, Pandey, Sushil, Harino, Paul, Siba, Peter, Coulter, Christopher, Mueller, Ivo, Phuanukoonnon, Suparat and Pellegrini, Marc (2014). TB incidence and characteristics in the remote gulf province of Papua New Guinea: A prospective study. BMC Infectious Diseases, 14 (1) 93. doi: 10.1186/1471-2334-14-93
Denholm, Justin T. and McBryde, Emma S. (2014). Can Australia eliminate TB? Modelling immigration strategies for reaching MDG targets in a low-transmission setting. Australian and New Zealand Journal of Public Health, 38 (1), 78-82. doi: 10.1111/1753-6405.12161
Hellard, Margaret, Doyle, Joseph S., Sacks-Davis, Rachel, Thompson, Alexander J. and Mcbryde, Emma (2014). Eradication of hepatitis C infection: The importance of targeting people who inject drugs. Hepatology, 59 (2), 366-369. doi: 10.1002/hep.26623
Doan, Tan N., Kong, David C. M., Kirkpatrick, Carl M. J. and McBryde, Emma S. (2014). Optimizing hospital infection control: The role of mathematical modeling. Infection Control and Hospital Epidemiology, 35 (12), 1521-1530. doi: 10.1086/678596
Eisen, Damon P., McBryde, Emma S. and Walduck, Anna (2013). Low-dose aspirin and ibuprofen's sterilizing effects on mycobacterium tuberculosis suggest safe newadjuvant therapies for tuberculosis. Journal of Infectious Diseases, 208 (11), 1925-1927. doi: 10.1093/infdis/jit476
Rolls, David A., Sacks-Davis, Rachel, Jenkinson, Rebecca, McBryde, Emma, Pattison, Philippa, Robins, Garry and Hellard, Margaret (2013). Hepatitis C transmission and treatment in contact networks of people who inject drugs. PLoS ONE, 8 (11) e78286. doi: 10.1371/journal.pone.0078286
Rolls, David A., Wang, Peng, Jenkinson, Rebecca, Pattison, Phillipa E., Robins, Garry L., Sacks-Davis, Rachel, Daraganova, Galina, Hellard, Margaret and McBryde, Emma (2013). Modelling a disease-relevant contact network of people who inject drugs. Social Networks, 35 (4), 699-710. doi: 10.1016/j.socnet.2013.06.003
Heng Sim, Benedict Lim, McBryde, Emma, Street, Alan C. and Marshall, Caroline (2013). Multiple site surveillance cultures as a predictor of methicillin-resistant Staphylococcus aureus infections. Infection Control and Hospital Epidemiology, 34 (8), 818-824. doi: 10.1086/671273
Marshall, Caroline, Richards, Michael and McBryde, Emma (2013). Do Active Surveillance and Contact Precautions Reduce MRSA Acquisition? A Prospective Interrupted Time Series. PLoS ONE, 8 (3) e58112. doi: 10.1371/journal.pone.0058112
Fielding, James E., Bergeri, Isabel, Higgins, Nasra, Kelly, Heath A., Meagher, Julian, McBryde, Emma S., Moran, Rodney, Hellard, Margaret E. and Lester, Rosemary A. (2013). The Spread of Influenza A(H1N1)pdm09 in Victorian School Children in 2009: Implications for Revised Pandemic Planning. PLoS ONE, 8 (2) e57265. doi: 10.1371/journal.pone.0057265
Denholm, Justin T., Leslie, D. E., Jenkin, G. A., Darby, J., Johnson, P. D.R., Graham, S. M., Brown, G. V., Sievers, A., Globan, M., Brown, L. K. and McBryde, E. S. (2012). Long-term follow-up of contacts exposed to multidrug-resistant tuberculosis in Victoria, Australia, 1995-2010. International Journal of Tuberculosis and Lung Disease, 16 (10), 1320-1325. doi: 10.5588/ijtld.12.0092
Denholm, Justin T., McBryde, Emma S. and Brown, Graham V. (2012). Ethical evaluation of immigration screening policy for latent tuberculosis infection. Australian and New Zealand Journal of Public Health, 36 (4), 325-328. doi: 10.1111/j.1753-6405.2012.00895.x
Eisen, Damon P., Reid, David and McBryde, Emma S. (2012). Acetyl salicylic acid usage and mortality in critically ill patients with the systemic inflammatory response syndrome and sepsis. Critical Care Medicine, 40 (6), 1761-1767. doi: 10.1097/CCM.0b013e318246b9df
Teh, Benjamin W., Street, Alan C., McBryde, Emma S. and Denholm, Justin T. (2012). Miliary tuberculosis following negative latent tuberculosis infection screening prior to tumor necrosis factor-α antagonists: Implications for management?. Journal of Rheumatology, 39 (6), 1297-1298. doi: 10.3899/jrheum.111577
McBryde, Emma S. (2012). The MJA and Gawler: A case of self-censorship?. Medical Journal of Australia, 196 (10). doi: 10.5694/mja12.10684
Rolls, D. A., Daraganova, G., Sacks-Davis, R., Hellard, M., Jenkinson, R., McBryde, E., Pattison, P. E. and Robins, G. L. (2012). Modelling hepatitis C transmission over a social network of injecting drug users. Journal of Theoretical Biology, 297, 73-87. doi: 10.1016/j.jtbi.2011.12.008
Commons, Robert J, McBryde, Emma, Valcanis, Mary, Powling, Joan, Street, Alan and Hogg, Geoff (2012). Twenty-six years of enteric fever in Australia: An epidemiological analysis of antibiotic resistance. Medical Journal of Australia, 196 (5), 332-336. doi: 10.5694/mja12.10082
Denholm, Justin T. and McBryde, Emma S. (2012). P2X7 A1513 polymorphisms and tuberculosis susceptibility. Respirology, 17 (1), 191-191. doi: 10.1111/j.1440-1843.2011.02064.x
McBryde, Emma S and Denholm, Justin T. (2012). Risk of active tuberculosis in immigrants: Effects of age, region of origin and time since arrival in a low-exposure setting. Medical Journal of Australia, 197 (8), 458-461. doi: 10.5694/mja12.10035
Eisen, Damon P., Marshall, Caroline, Dean, Melinda M., Sasadeusz, Joe, Richards, Michael, Buising, Kirsty, Cheng, Allen, Johnson, Paul D.R., Barr, Ian G. and McBryde, Emma S. (2011). No association between mannose-binding lectin deficiency and H1N1 2009 infection observed during the first season of this novel pandemic influenza virus. Human Immunology, 72 (11), 1091-1094. doi: 10.1016/j.humimm.2011.08.014
Glass, K., Mercer, G. N., Nishiura, H., McBryde, E. S. and Becker, N. G. (2011). Estimating reproduction numbers for adults and children from case data. Journal of the Royal Society Interface, 8 (62), 1248-1259. doi: 10.1098/rsif.2010.0679
van Gemert, Caroline, Hellard, Margaret, McBryde, Emma S., Fielding, James, Spelman, Tim, Higgins, Nasra, Lester, Rosemary, Vally, Hassan and Bergeri, Isabel (2011). Intrahousehold transmission of pandemic (H1N1) 2009 virus, Victoria, Australia. Emerging Infectious Diseases, 17 (9), 1599-1607. doi: 10.3201/eid1709.101948
Marshall, Caroline, Kelso, Anne, McBryde, Emma, Barr, Ian G, Eisen, Damon P, Sasadeusz, Joe, Buising, Kirsty, Cheng, Allen C, Johnson, Paul and Richards, Michael (2011). Pandemic (H1N1) 2009 risk for frontline health care workers. Emerging infectious diseases, 17 (6), 1000-6. doi: 10.3201/eid/1706.101030
Marshall, Caroline, Kelso, Anne, McBryde, Emma, Barr, Ian G., Eisen, Damon P., Sasadeusz, Joe, Buising, Kirsty, Cheng, Allen C., Johnson, Paul and Richards, Michael (2011). Pandemic (H1N1) 2009 Risk for Frontline Health Care Workers. Emerging Infectious Diseases, 17 (6), 1000-1006. doi: 10.3201/eid1706.101030
Denholm, Justin T. and McBryde, Emma S. (2011). TIRAP polymorphisms and TB susceptibility. Tuberculosis, 91 (4). doi: 10.1016/j.tube.2011.04.009
Denholm, Justin T and McBryde, Emma S (2010). Management of latent tuberculosis infections in Australia and New Zealand: a review of current practice. Tuberculosis Research and Treatment, 2010 284028, 1-5. doi: 10.1155/2010/284028
Schulz, Thomas R., Street, Alan C. and McBryde, Emma S. (2010). The limitations of polymerase chain reaction in the setting of possible recurrent tuberculosis: 2 instructional cases. Diagnostic Microbiology and Infectious Disease, 68 (3), 293-296. doi: 10.1016/j.diagmicrobio.2010.07.022
Ananda-Rajah, Michelle R., McBryde, Emma S., Buising, Kirsty L., Redl, Leanne, MacIsaac, Christopher, Cade, John F. and Marshall, Caroline (2010). The role of general quality improvement measures in decreasing the burden of endemic MRSA in a medical-surgical intensive care unit. Intensive Care Medicine, 36 (11), 1890-1898. doi: 10.1007/s00134-010-2019-x
Denholm, J. T., McBryde, E. S. and Eisen, D. P. (2010). Mannose-binding lectin and susceptibility to tuberculosis: A meta-analysis. Clinical and Experimental Immunology, 162 (1), 84-90. doi: 10.1111/j.1365-2249.2010.04221.x
Denholm, Justin T. and McBryde, Emma S. (2010). The use of anti-tuberculosis therapy for latent TB infection. Infection and Drug Resistance, 3, 63-72. doi: 10.2147/idr.s8994
van Kerkhove, Maria D., Asikainen, Tommi, Becker, Niels G., Bjorge, Steven, Desenclos, Jean-Claude, Santos, Thais Dos, Fraser, Christophe, Leung, Gabriel M., Lipsitch, Marc, Longini Jr., Ira M., Mcbryde, Emma S., Roth, Cathy E., Shay, David K., Smith, Derek J., Wallinga, Jacco, White, Peter J., Ferguson, Neil M. and Riley, Steven (2010). Studies needed to address public health challenges of the 2009 H1N1 influenza pandemic: Insights from modeling. PLoS Medicine, 7 (6). doi: 10.1371/journal.pmed.1000275
Mathews, John D., McBryde, Emma S., McVernon, Jodie, Pallaghy, Paul K. and McCaw, James M. (2010). Prior immunity helps to explain wave-like behaviour of pandemic influenza in 1918-9. BMC Infectious Diseases, 10 128. doi: 10.1186/1471-2334-10-128
WHO Informal Network for Mathematical Modelling for Pandemic Influenza H1N1 2009 (Working Group on Data Needs) and McBryde, Emma (2009). Studies needed to address public health challenges of the 2009 H1N1 influenza pandemic: insights from modeling. PLoS Currents, 1 RRN1135. doi: 10.1371/currents.RRN1135
Playford, E. G., Lipman, J., Kabir, M., McBryde, E. S., Nimmo, Graeme R., Lau, A. and Sorrell, T. C. (2009). Assessment of clinical risk predictive rules for invasive candidiasis in a prospective multicentre cohort of ICU patients. Intensive Care Medicine, 35 (12), 2141-2145. doi: 10.1007/s00134-009-1619-9
Eisen, Damon P. and McBryde, Emma S. (2009). Avoiding guillan-barré syndrome following swine origin pandemic H1N1 2009 influenza vaccination. Journal of Infectious Diseases, 200 (10), 1627-1628. doi: 10.1086/644782
McBryde, Emma S., Brett, Judy, Russo, Philip L., Worth, Leon J., Bull, Ann L. and Richards, Michael J. (2009). Validation of statewide surveillance system data on central line-associated bloodstream infection in intensive care units in Australia. Infection Control and Hospital Epidemiology, 30 (11), 1045-1049. doi: 10.1086/606168
McBryde, E. S., Bergeri, I., van Gemert, C., Rotty, J., Headley, E. J., Simpson, K., Lester, R. A., Hellard, M. and Fielding, J. E. (2009). EARLY TRANSMISSION CHARACTERISTICS OF INFLUENZA A(H1N1)V IN AUSTRALIA: VICTORIAN STATE, 16 MAY-3 JUNE 2009. Eurosurveillance, 14 (42), 45-50. doi: 10.2807/ese.14.42.19363-en
Cheng, Allen C., McBryde, Emma S., Wuthiekanun, Vanaporn, Chierakul, Wirongrong, Amornchai, Premjit, Day, Nicholas P. J., White, Nicholas J. and Peacock, Sharon J. (2009). Dosing regimens of cotrimoxazole (trimethoprim-sulfamethoxazole) for melioidosis. Antimicrobial Agents and Chemotherapy, 53 (10), 4193-4199. doi: 10.1128/AAC.01301-08
Worth, Leon J., Brett, Judy, Bull, Ann L., McBryde, Emma S., Russo, Philip L. and Richards, Michael J. (2009). Impact of revising the National Nosocomial Infection Surveillance System definition for catheter-related bloodstream infection in ICU: Reproducibility of the National Healthcare Safety Network case definition in an Australian cohort of infection control professionals. American Journal of Infection Control, 37 (8), 643-648. doi: 10.1016/j.ajic.2009.02.013
McCaw, James M., McVernon, Jodie, McBryde, Emma S. and Mathews, John D. (2009). Influenza: Accounting for Prior Immunity. Science, 325 (5944), 1071-1071. doi: 10.1126/science.325_1071a
McCaw, James M, Wood, James G, McBryde, Emma S, Nolan, Terry M, Wu, Joseph T, Lipsitch, Marc and McVernon, Jodie (2009). Understanding Australia's influenza pandemic policy on the strategic use of the antiviral drug stockpile. The Medical journal of Australia, 191 (3), 136-7. doi: 10.5694/j.1326-5377.2009.tb02720.x
Eisen, Damon P., Corey, G. Ralph, McBryde, Emma S., Fowler Jr., Vance G., Miro, Jose M., Cabell, Chris H., Street, Alan C., Paiva, Marcelo Goulart, Ionac, Adina, Tan, Ru-San, Tribouilloy, Christophe, Pachirat, Orathai, Jones, Sandra Braun, Chipigina, Natalia, Naber, Christoph, Pan, Angelo, Ravasio, Veronica, Gattringer, Rainer, Chu, Vivian H. and Bayer, Arnold S. (2009). Reduced valve replacement surgery and complication rate in Staphylococcus aureus endocarditis patients receiving acetyl-salicylic acid. Journal of Infection, 58 (5), 332-338. doi: 10.1016/j.jinf.2009.03.006
McBryde, Emma S. (2009). Network structure can play a role in vaccination thresholds and herd immunity: A simulation using a network mathematical model. Clinical Infectious Diseases, 48 (5), 685-686. doi: 10.1086/597012
Marshall, Caroline, Spelman, Denis, Harrington, Glenys and McBryde, Emma (2009). Daily hazard of acquisition of methicillin-resistant Staphylococcus aureus infection in the intensive care unit. Infection Control and Hospital Epidemiology, 30 (2), 125-129. doi: 10.1086/593967
Eisen, Damon P. and McBryde, Emma S. (2008). Reply to Smithson et al. Clinical Infectious Diseases, 47 (11). doi: 10.1086/593107
Eisen, Damon P., Dean, Melinda M., Boermeester, Marja A., Fidler, Katy J., Gordon, Anthony C., Kronborg, Gitte, Kun, Jürgen F. J., Yu, Lung Lau, Payeras, Antonis, Valdimarsson, Helgi, Brett, Stephen J., Ip, W. K. Eddie, Mila, Joan, Peters, Mark J., Saevarsdottir, Saedis, Van Till, J. W. Oliver, Hinds, Charles J. and McBryde, Emma S. (2008). Low serum mannose-binding lectin level increases the risk of death due to pneumococcal infection. Clinical Infectious Diseases, 47 (4), 510-516. doi: 10.1086/590006
Kelly, H., Bull, A., Russo, P. and McBryde, E. S. (2008). Estimating sensitivity and specificity from positive predictive value, negative predictive value and prevalence: application to surveillance systems for hospital-acquired infections. Journal of Hospital Infection, 69 (2), 164-168. doi: 10.1016/j.jhin.2008.02.021
McBryde, Emma S., Kelly, Heath, Marshall, Caroline, Russo, Philip L., McElwain, D. L. Sean and Pettitt, Anthony N. (2008). Using samples to estimate the sensitivity and specificity of a surveillance process. Infection Control and Hospital Epidemiology, 29 (6), 559-563. doi: 10.1086/588203
Morpeth, Susan, Murdoch, David, Cabell, Christopher H., Karchmer, Adolf W., Pappas, Paul, Levine, Donald, Nacinovich, Francisco, Tattevin, Pierre, Fernández-Hidalgo, Núria, Dickerman, Stuart, Bouza, Emilio, Del Río, Ana, Lejko-Zupanc, Tatjana, De Oliveira Ramos, Auristela, Iarussi, Diana, Klein, John, Chirouze, Catherine, Bedimo, Roger, Corey, G. Ralph, Fowler Jr., Vance G., Gordon, David, Devi, Uma, Spelman, Denis, Van Der Meer, Jan T. M., Kauffman, Carol, Bradley, Suzanne, Armstrong, William, Giannitsioti, Efthymia, Giamarellou, Helen ... Eykyn, Susannah (2007). Non-HACEK gram-negative bacillus endocarditis. Annals of Internal Medicine, 147 (12), 829-835. doi: 10.7326/0003-4819-147-12-200712180-00002
Mathews, John D., McCaw, Christopher T., McVernon, Jodie, McBryde, Emma S. and McCaw, James M. (2007). A Biological Model for Influenza Transmission: Pandemic Planning Implications of Asymptomatic Infection and Immunity. Plos One, 2 (11) e1220. doi: 10.1371/journal.pone.0001220
Friedman, N. Deborah, Bull, Ann L., Russo, Philip L., Leder, Karin, Reid, Christopher, Billah, Baki, Marasco, Silvana, McBryde, Emma and Richards, Michael J. (2007). An alternative scoring system to predict risk for surgical site infection complicating coronary artery bypass graft surgery. Infection Control and Hospital Epidemiology, 28 (10), 1162-1168. doi: 10.1086/519534
McBryde, E. S., Pettitt, A. N., Cooper, B. S. and McElwain, D. L.S. (2007). Characterizing an outbreak of vancomycin-resistant enterococci using hidden Markov models. Journal of the Royal Society Interface, 4 (15), 745-754. doi: 10.1098/rsif.2007.0224
McBryde, E. S., Pettitt, A. N. and McElwain, D. L.S. (2007). A stochastic mathematical model of methicillin resistant Staphylococcus aureus transmission in an intensive care unit: Predicting the impact of interventions. Journal of Theoretical Biology, 245 (3), 470-481. doi: 10.1016/j.jtbi.2006.11.008
Eisen, Damon P., Cheng, Allen C. and McBryde, Emma S. (2007). Letters to the editor [1]. Surgical Infections, 8 (1), 121-122. doi: 10.1089/sur.2006.093
McBryde, Emma S. and McElwain, Donald L. S. (2006). A mathematical model investigating the impact of an environmental reservoir on the prevalence and control of vancomycin-resistant enterococci [3]. Journal of Infectious Diseases, 193 (10), 1473-1474. doi: 10.1086/503439
McBryde, E. S., Gibson, G., Pettitt, A. N., Zhang, Y., Zhao, B. and McElwain, D. L.S. (2006). Bayesian modelling of an epidemic of severe acute respiratory syndrome. Bulletin of Mathematical Biology, 68 (4), 889-917. doi: 10.1007/s11538-005-9005-4
McBryde, E. S., Tilse, M. and McCormack, J. (2005). Comparison of contamination rates of catheter-drawn and peripheral blood cultures. Journal of Hospital Infection, 60 (2), 118-121. doi: 10.1016/j.jhin.2004.10.020
Kennedy, G. A., Curnow, J. L., Gooch, J., Williams, B., Wood, P., Pitman, C., McBryde, E. and Woods, M. (2002). Histoplasma capsulatum in peripheral blood smears. British Journal of Haematology, 116 (3), 503-503. doi: 10.1046/j.0007-1048.2001.03276.x
Conference Papers
Doyle, Joseph, Dietze, Paul, Stoove, Mark, Higgs, Peter, Desmond, Paul, Iser, David, Mcbryde, Emma, Harney, Brendan, Pedrana, Alisa, Spelman, Tim, Von Bibra, Sally, Roney, Janine, Thompson, Alexander and Hellard, Margaret (2019). Community-based hepatitis C treatment of people who inject drugs and their injecting network is feasible and effective: Results from the TAP (Treatment And Prevention) study. International Liver Congress / 54th Annual Meeting of the European-Association-for-the-Study-of-the-Liver (EASL), Vienna Austria, Apr 10-14, 2019. AMSTERDAM: ELSEVIER. doi: 10.1016/S0618-8278(19)30973-9
Russell, Tanya, Bobogare, Albino, MacLaren, David, McBryde, Emma, Horwood, Paul and Burkot, Tom (2019). Enhanced Surveillance For Dengue, Zika And Chikungunya In The Solomon Islands. 68th Annual Meeting of the American Society for Tropical Medicine and Hygiene (ASTMH), National Harbor, MD United States, 20-24 November 2019. Deerfield, IL United States: American Society of Tropical Medicine and Hygiene.
Le, T. T., Tran, T. T., Ho, H. T., Nguyen, D. H., Vu, A. T., Taki, A., Mcbryde, E. and Lopata, A. L. (2017). Prevalence of food allergy in Vietnam: the first population-based study. Congress of the European-Academy-of-Allergy-and-Clinical-Immunology, Helsinki Finland, Jun 17-21, 2017. HOBOKEN: WILEY.
von Bibra, S., Doyle, J. S., Higgs, P., Dietze, P., Desmond, P., Stoove, M., McBryde, E., Burke, L., Lupi, J., Bryant, M., Thompson, A. J. and Hellard, M. E. (2016). FEASIBILIY OF RECRUITING PEOPLE WHO INJECT DRUGS INTO A NURSE-LED MODEL OF CARE TRIAL: THE TAP STUDY. EASL International Liver Congress, Barcelona Spain, Apr 13-17, 2016. AMSTERDAM: ELSEVIER SCIENCE BV. doi: 10.1016/S0168-8278(16)01598-1
Doyle, J. S., Dietze, P., Desmond, P., Iser, D. M., Stoove, M., McBryde, E., Higgs, P., Hellard, M. E. and Thompson, A. J. (2016). HEPATIC FIBROSIS MEASURED BY ELASTOGRAPHY AMONG PEOPLE WHO INJECT DRUGS WITH CHRONIC HCV IN COMMUNITY SETTINGS: THE TAP STUDY. EASL International Liver Congress, Barcelona Spain, Apr 13-17, 2016. AMSTERDAM: ELSEVIER SCIENCE BV. doi: 10.1016/S0168-8278(16)01526-9
Scott, N., McBryde, E., Vickerman, P., Martin, N. K., Stone, J., Drummer, H. and Hellard, M. (2015). The role of a hepatitis C virus vaccine: modelling the benefits alongside direct-acting antiviral treatments. 15th International Symposium on Viral Hepatitis and Liver Diseases (ISVHLD), Berlin Germany, Jun 26-28, 2015. HOBOKEN: WILEY-BLACKWELL. doi: 10.1111/jvh.72_12425
Hellard, M., Rolls, D., Davis, R. Sacks, Robins, G., Pattison, P., Higgs, P., Aitken, C. and McBryde, E. (2013). THE IMPACT OF INJECTING NETWORKS ON HEPATITIS C TRANSMISSION AND TREATMENT IN PEOPLE WHO INJECT DRUGS. International Liver Congress / 48th Annual Meeting of the European-Association-for-the-Study-of-the-Liver (EASL), Amsterdam Netherlands, Apr 24-28, 2013. AMSTERDAM: ELSEVIER SCIENCE BV. doi: 10.1016/S0168-8278(13)60056-2
Jenkinson, Rebecca, Rolls, David, Daraganova, Galina, Sacks-Davis, Rachel, McBryde, Emma S., Pattison, Phillipa, Robins, Garry and Hellard, Margaret (2011). TRANSMISSION OF HEPATITIS C VIRUS AMONG PEOPLE WHO INJECT DRUGS: THE IMPORTANCE OF SOCIAL NETWORK STRUCTURE. 62nd Annual Meeting of the American-Association-for-the-Study-of-Liver-Diseases (AASLD), San Francisco Ca, Nov 04-08, 2011. MALDEN: WILEY-BLACKWELL.
Marshall, C., McBryde, E. and Richards, M. (2011). Do rapid detection and isolation of colonized patients reduce MRSA spread in the intensive care unit?. International Conference on Prevention and Infection Control (ICPIC 2011), Geneva, Switzerland, 25-28 June 2013. London, United Kingdom: BioMed Central. doi: 10.1186/1753-6561-5-s6-o88
McBryde, E. S., Higgins, N., Read, T., Wallis, S. and Fairly, C. (2008). Enhanced Surveillance Study of New Cases of Syphilis in Australia. OXFORD: ELSEVIER SCI LTD. doi: 10.1016/j.ijid.2008.05.449
Chua, H. H. and McBryde, E. (2008). Identifying Influenza Among Influenza-like Illness Cases Presented to Emergency Department of a Tertiary Hospital Over One Year Period. OXFORD: ELSEVIER SCI LTD. doi: 10.1016/j.ijid.2008.05.240